CDS
| Accession Number | TCMCG007C36054 |
| gbkey | CDS |
| Protein Id | XP_033128396.1 |
| Location | join(4519198..4519326,4519709..4519772,4519869..4520110,4520147..4520978,4521046..4521260,4521334..4521607,4521681..4521856,4521935..4522042,4522138..4522247,4522343..4522448,4522517..4522687,4522761..4522889,4522974..4523156,4523229..4523360,4523432..4523543,4523617..4523740,4523806..4523935) |
| Gene | LOC103871924 |
| GeneID | 103871924 |
| Organism | Brassica rapa |
Protein
| Length | 1078aa |
| Molecule type | protein |
| Topology | linear |
| Data_file_division | PLN |
| dblink | BioProject:PRJNA249065 |
| db_source | XM_033272505.1 |
| Definition | starch synthase 3, chloroplastic/amyloplastic isoform X2 [Brassica rapa] |
EGGNOG-MAPPER Annotation
| COG_category | M |
| Description | galactosyltransferase activity |
| KEGG_TC | - |
| KEGG_Module | - |
| KEGG_Reaction | - |
| KEGG_rclass | - |
| BRITE |
ko00000
[VIEW IN KEGG] ko01000 [VIEW IN KEGG] ko01003 [VIEW IN KEGG] |
| KEGG_ko |
ko:K20854
[VIEW IN KEGG] ko:K20855 [VIEW IN KEGG] ko:K20856 [VIEW IN KEGG] |
| EC | - |
| KEGG_Pathway | - |
| GOs |
GO:0005575
[VIEW IN EMBL-EBI] GO:0005622 [VIEW IN EMBL-EBI] GO:0005623 [VIEW IN EMBL-EBI] GO:0005737 [VIEW IN EMBL-EBI] GO:0005794 [VIEW IN EMBL-EBI] GO:0012505 [VIEW IN EMBL-EBI] GO:0043226 [VIEW IN EMBL-EBI] GO:0043227 [VIEW IN EMBL-EBI] GO:0043229 [VIEW IN EMBL-EBI] GO:0043231 [VIEW IN EMBL-EBI] GO:0044424 [VIEW IN EMBL-EBI] GO:0044444 [VIEW IN EMBL-EBI] GO:0044464 [VIEW IN EMBL-EBI] |
Sequence
| CDS: ATGGAAATGTGTTGGCAGATACAGAGACCGGCGAGTCTCAGACTGGTGTTACATCAAAAGGGTCGGCTCAAGATCAATACTTGTATTGGTTTTCTCCATCCTCACCCCAAATCTTACTCCTTTTCCAGTCTTGCTTCGTTGGAAAGTCAATACAGCTCAAATGGGTTTCTGCATCAGATCACGGCAACTACAGATTTTTCAAGGAAGAAGCAAGGGAGAATGTCAGCTTCAGGGCCCAAAAGCTCAGCTCCAACAGGCTTTGGGCGACGAACAAGTGCTCAGAAGAAGAACGTTGAAAAAGATAGCAATGCAACTTCTACAGTAACAAATGAGGTTTTACGGATCAGTAACTTGCCAGAAGCTAAAGCGATTGTGGAGAATCAAAGTTCTGAAGTTTTTGGTGAGAGGAATGTGTTAGATAGGTCGGAAACTGAGGATGACGCTTTATTACAAGTTAAGATAAAAGCTGAAAGAGAGAATCTTCGTAGGAAGGAAATAGAAGCGCTTGCTGAGGAAACTTTGTTGAGAGGTGATAGAATGTTTGTATATCCTCTTACTGCGAAGCCTGATGAAGACATAGAAGTGTTTCTCAACATAACTCTATCAACTCTGAATAAAGAACCCGATGTTTTGATCATGGGGGCGTTCAACGACTGGAGATGGAAATCTTTCACGAGGATATTGGAAAAGACATGGATCAATGGAGATTGGTTGTCTTGTCTCGTCCATATCCCTAAAGAAGCATATAAGATTGACTTTGTGTTTTTCAATGGCCAAAGTGTTTATGACAACAATAACTCAAAAGATTTTATTATAGATATTAAAAATGGGATGGATAAAGTAGAGTTTGAGAATTTTCTTCTAGAAGAGAAGTGGAGAGAGCAAGAGAAGCTAGCTAAGGAAGAAGCTGAGAGGGAAAGGGAAGAGGAAGAGAAGAGAAGAATCGAAGCTCGGAAGGCTGCTATTGAAGCTGATAGAGCACAAGCAAAGGCGGAGACACAGAGGAGACGTGAAATGCTTCAACAGGCTCTTGAGAAAGCTGTAGTCTCGGCTAGGAATGTATGGTACATTGAGCCGAGCAATTTCAAAGGCGGAGATAGAGTGAAGCTATATTACAACAAAAGCTCTGGTCCTCTAGCTAATGCCAAAGAGATCTGGACACATGGAGGGTTTAATAATTGGGTTGATGGTTTATCTATCGCTGAAAAGCTTGTTGATGCTGAGCTTGAGGATGATTCAAAGAGTGGAGACTGGTGGTTCGCTGAAGTCATAGTGCCGGTCCGTGCTCTAGTCATTGACTGGGTCTTTGCTGATGGACCGCCTGAAGGAGCGTTTCTGTATGACAACAATAGTCGCCAAGATTTCCACGCACTTGTTCCTCTAACAACTCCAGAAGAAGTTTACTGGTCAGAGGAAGAAGATCTAATGTTTAGGAAACTTCAGGAGGAGAGGAGGTTAAAAGAGGAAGCTATGCGTGTCAAGATGGAGAAAACAGGTCGCTTGAAAGCCGAAACTAAGGAACGAACACTTAAAAAGTTTCTGCTTTCCCAGAAAGACGTGGTTTACACGGAGCCTCTAGAGATTCAAGCAGGAAGCTCTGTGACAGTTTTGTACAATCCTTCAAACACGGTTTTGAAAGGAAAGCCTGAGGTTTGGTTTAGAGGCTCTTTTAATCGTTGGACTCATCGCTTGGGTCCTTTGCCACCTCAGAAAATGGAAGCAGCAGATGATGGAAGCTCACACTTGAAGACTTCTGCTAAGGTCCCGTTGGATGCTTACATGATGGACTTTGTTTTCTCCGAGAAAGAAGATGGTGGAGTTTTTGATAACAAAGATGGTTTGGATTACCACTTACCTGTCGTGGGAGGTATTGCCAAGGAACCACCATTGCACATTGTTCATATTGCTGTTGAAATGGCACCCATTGCAAAGGTTGGAGGCTTAGGTGATGTGGTCACTAGTCTATCTCGCGCTGTTCAAGAACTAAACCATAATGTGGATATCATCTTTCCAAATTATGATTGCATAAAGTACAACTTTGTGAAGGACTTGCAGTTCAACAGAAGCTATCACTGGGGAGGTACAGAAATAAAAGTCTGGCATGGGAAGGTGGAAGGCGTTTCTGTTTACTTCTTAGATCCGCAAAACGGATTGTTTCAGAGAGGATGTGTTTACGGTTGCGCAGATGATGCAGGAAGATTTGGTTTCTTCTGTCATGCTGCTCTTGAATTTCTTCTTCAAGGAGGCTTTCATCCAGACATTCTTCACTGTCACGACTGGTCCAGTGCTCCAGTTTCATGGCTGTTCAAGGATCATTACACTCATTACGGTTTAGTTAAAACTCGCGTTGTCTTCACAATCCATAATCTGGAATTTGGGGCAGGTGCCATTGGTAAAGCCATGAAATTTTCAGATAAAGCGACTACGGTGTCACGAACGTATGCCAAGGAAGTAGCTGGAAACTCTGTGATATCTCCACATTTATACAAGTTCCACGGAATAGTAAACGGTATCGACCCTGATATATGGGATCCGTACAACGATAACTTCATACCCGTGCCTTATACTTCAGAGAACGTGTTAGAAGGCAAAAGAGCAGCAAAGGAAGAATTGCAAAAGAGGCTTGGACTAAAGAGTTCTGATCTTCCGTTAGTAGGGATTATTACGCGCTTAACTCACCAGAAAGGAATACATTTGATCAAACACGCTATTTGGCGTACCTTGGAACGCAATGGACAGGTTGTGTTGCTAGGTTCAGCTCCGGATCCTCGGATCCAAAATGATTTTGTGAACTTGGCTAACCAGTTGCATTCTACTCATGGGGACCGTGCTCGGCTTGTTCTAACCTACGATGAACCTCTTTCCCATTTGATATACGCAGGGGCTGACTTTATTCTTGTACCGTCGATATTTGAGCCGTGTGGACTGACACAGCTCATAGCCATGAGATACGGCTCTGTTCCTATCGTTAGAAAAACTGGAGGACTCTACGACACGGTTTTTGATGTGGACCATGATAAAGAAAGAGCACAAGCACAAGTTCTAGAACCTAACGGCTTCAGCTTCGACGGGGCTGATGCTCCTGGTGTGGACTATGCTCTCAATAGGGCGATATCAGCGTGGTATGATGGTAGAGAGTGGTTTAACTCACTATGTAAGACGGTGATGGAGCAAGACTGGTCATGGAATCGTCCTGCGCTTGAGTACATTGAGCTCTATCACTCTGCACGCAAGTGA |
| Protein: MEMCWQIQRPASLRLVLHQKGRLKINTCIGFLHPHPKSYSFSSLASLESQYSSNGFLHQITATTDFSRKKQGRMSASGPKSSAPTGFGRRTSAQKKNVEKDSNATSTVTNEVLRISNLPEAKAIVENQSSEVFGERNVLDRSETEDDALLQVKIKAERENLRRKEIEALAEETLLRGDRMFVYPLTAKPDEDIEVFLNITLSTLNKEPDVLIMGAFNDWRWKSFTRILEKTWINGDWLSCLVHIPKEAYKIDFVFFNGQSVYDNNNSKDFIIDIKNGMDKVEFENFLLEEKWREQEKLAKEEAEREREEEEKRRIEARKAAIEADRAQAKAETQRRREMLQQALEKAVVSARNVWYIEPSNFKGGDRVKLYYNKSSGPLANAKEIWTHGGFNNWVDGLSIAEKLVDAELEDDSKSGDWWFAEVIVPVRALVIDWVFADGPPEGAFLYDNNSRQDFHALVPLTTPEEVYWSEEEDLMFRKLQEERRLKEEAMRVKMEKTGRLKAETKERTLKKFLLSQKDVVYTEPLEIQAGSSVTVLYNPSNTVLKGKPEVWFRGSFNRWTHRLGPLPPQKMEAADDGSSHLKTSAKVPLDAYMMDFVFSEKEDGGVFDNKDGLDYHLPVVGGIAKEPPLHIVHIAVEMAPIAKVGGLGDVVTSLSRAVQELNHNVDIIFPNYDCIKYNFVKDLQFNRSYHWGGTEIKVWHGKVEGVSVYFLDPQNGLFQRGCVYGCADDAGRFGFFCHAALEFLLQGGFHPDILHCHDWSSAPVSWLFKDHYTHYGLVKTRVVFTIHNLEFGAGAIGKAMKFSDKATTVSRTYAKEVAGNSVISPHLYKFHGIVNGIDPDIWDPYNDNFIPVPYTSENVLEGKRAAKEELQKRLGLKSSDLPLVGIITRLTHQKGIHLIKHAIWRTLERNGQVVLLGSAPDPRIQNDFVNLANQLHSTHGDRARLVLTYDEPLSHLIYAGADFILVPSIFEPCGLTQLIAMRYGSVPIVRKTGGLYDTVFDVDHDKERAQAQVLEPNGFSFDGADAPGVDYALNRAISAWYDGREWFNSLCKTVMEQDWSWNRPALEYIELYHSARK |